CDS
Accession Number | TCMCG007C35638 |
gbkey | CDS |
Protein Id | XP_009148082.1 |
Location | join(3228689..3228847,3228992..3229057,3229175..3229234,3229335..3229430,3229823..3229983,3230124..3230212,3230288..3230505,3230953..3231039,3231122..3231256,3231722..3231844,3231956..3232039,3232324..3232488,3232574..3232750,3232883..3232996,3233389..3233493,3233657..3233920,3233999..3234093,3234265..3234370,3234454..3234533,3234634..3234810,3234929..3235013,3235145..3235225,3235309..3235452,3236035..3236130,3236256..3236456,3236623..3236686,3236767..3236921,3236991..3237391,3237545..3237674,3237751..3237948,3238026..3238100,3238571..3238761,3238866..3239046,3239127..3239191,3239491..3239623,3239732..3239833,3239919..3240002,3240251..3240325,3240447..3240506,3240579..3240841,3240920..3240968,3241286..3241446,3241548..3241614,3241957..3242061,3242176..3242295,3242375..3242563,3242750..3242856,3243251..3243650) |
Gene | LOC103871570 |
GeneID | 103871570 |
Organism | Brassica rapa |
Protein
Length | 2180aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA249065 |
db_source | XM_009149834.3 |
Definition | DNA polymerase epsilon catalytic subunit A [Brassica rapa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGAGCGGAGATAATCGAAGATGGGATCGAAAGGACTCGCGGAGATCGAATACTCAGAAAGTCGTGAAAACGGCGGAAGATGAGCTCGAATCTAAACTCGGATTTGGGCTTTTCTCCGAAGGGGAAACGCGCCTCGGGTGGCTACTCACATTCGCATCATCATCTTGGGAAGATCCCGATACTGGGAAGATTTATAGCTGTGTGGATCTTTACTTTGTTACTCAGGACGGGTTTTATTTCAAGACAAAGTACAAGTTCCGCCCGTACTTCTATGCAGCTACGAAAGAGAAAATGGAACTGGAAGTTGAAGCGTACTTGAGACGGCGATATGAAAGACAAGTTGCTGATATTGAGATTGTTGAAAAAGAGGATCTTGATCTTAAAAATCATCTATCTGGCCTGCGAAAGAAATACCTAAAAGTATCATTTGATACTGTGCAACAATTGATGGAAGTCAAGAGGGATCTGTCGCATGTTGTCGAACGAAACCAGGCAAAATTTGACGCACTTGAAGCATACGAATCCATTTTGGCTGGAAAACGAGAACAACGTCTTCAAGATTGCTTAGACTCTTTAGTGGACCTCCGCGAGTACGATGTTCCTTATCATGTTCGATTTGCAGTTGATAAAGATGTGCGGAGTGGGCAATGGTACAATGTCAGTATTTCCAGCACTGATGTCACACTAGAGAAGAGGACAGATATTCTCCAGCGCGCAGAAGTCCGTGTTTGTGCATTCGATATAGAGACAACAAAGCTTGAGTTGAAATTTCCGGATGCTGAATATGATCAAATTATGATGATATCTTACATGGTCGATGGGCAAGGTTTTCTAATTGTTAACAGAGAGTGTGTTGGCGAAGACATAGAAGATCTGGAGTATACACCCAAACCAGAGTTTGAAGGATATTTCAAAGTTACTAACGTTAGCAACGAGGTTGAACTCCTTCGAAAATGGTTTTCCCATATGCAAGAGGTTAAACCCGGTATTTATGTTACATATAACGGTGATTTTTTCGACTGGCCATTTATAGAACGCAGAGCATCCCATCATGAGATCAAAATGAATGAGGAGTTGGGATTCCGTTGTGATCATAATCAAGGTGAATGTCGAGCTAAATTCGTTTGCCATTTAGATTGTTTTGCTTGGGTGAAACGGGATAGCTATCTTCCTCAGGGAAGCCATGGTCTGAAGGCCGTTACAAAGGCGAAACTGGGCTATGATCCACTGGAAGTGAACCCAGAAGACATGGTTCAGTTTGCCATGGAGAAACCACAGACAATGGCCTCCTATTCTGTCTCTGATGCTGTTGCAACTTATTACCTATACATGACATATGTTCACCCGTTCATTTTTTCTCTCGCGACTATCATCCCTATGGTCCCTGATGAGGTCTTACGTAAAGGAAGTGGAACCCTTTGTGAAATGCTTCTGATGGTTGAGGCGTATAAGGCAAATGTTGTATGTCCCAATAAAAACCAAGCTGACCCTGAGAAGTTCTACCAAAGTCACCTTCTTGAAAGTGAGACATATATTGGTGGCCATGTAGAGTGCCTCGAAAGTGGTGTTTTCCGATCTGACATTCCAACCAGTTTTAAGCTAGACACATCGGCATACCAGCAACTGATCGATAACCTTGACCGGGATCTGGAGTATGCTATCACTGTAGAAGGGAAAATGAGAATGGATTCAGTTTCCAATTATGATGAAGTGAAGGAAAAAATCAAGGAAAAGCTGGAAAAGTTACGAGATTGCCCTATACGTGAAGAGGGACCTCTTATTTATCACCTTGATGTTGCAGCGATGTATCCAAATATCATCTTAACAAATAGGCTTCAGCCACCATCAATAGTTACGAATGAAATTTGCACCGCATGTGATTTCAACCGCCCGGGAAAAACGTGTCTTCGAAAACTTGAATGGGTTTGGCGTGGGGTGACATACATGGCCAAGAAAAGTGATTATTACCATCTGAAGAAGCAGATTGAGTCCGAATTTGTTGATGCTGGTGCAAATATTCAGTCTTCAAAATCTTTCCTTGATCTACCAAAGGTGGAGCAACAATCTAAACTAAAAGAAAGACTGAAAAAATATTGTCAAAAGGCATATCGACGAGTACTTGACAAGCCAAGCACTGAAATTCTTGAGGCTGGGATATGCATGAGAGAAAATCCGTTTTATGTAGACACTGTTCGAAGCTTTCGAGATAGGAGGTATGAATACAAAACACTTAACAAGGTCTGGAAGGGAAAGTTGTCAGAGGCCAAGGCAAGTGGCAATTCAATCAAGATCCAGGAAGCACAGGACATGGTAGTGGTTTACGATTCCTTGCAGCTAGCTCATAAGTGTATTCTTAATTCCTTCTATGGATATGTCATGCGAAAGGGTGCAAGATGGTACTCTATGGAAATGGCTGGTGTAGTTACCTATACTGGAGCCAAAATCATCCAGAATGCCCGTTTGCTTATTGAGCGTATTGGGAGACCACTTGAGTTGGATACAGATGGTATATGGTGTGCTCTACCTGGATCTTTTCCTGAGAACTTTACTTTTAAGACGATAGACATGAAGAAATTCACGATCTCTTATCCGTGTGTAATGCTTAATGTTGATGTGGCTAAAAATAATACAAATGATCAATATCAGACTCTTGTAGATCCTGTACGCAAGACGTACGAGTCGCATAGTGAATGCTCCATTGAATTCGAAGTGGATGGACCGTACAAGGCAATGATTATTCCTGCATCGAAAGAAGAAGGAGTCTTACTTAAGAAGCGGTATGCTGTTTTCAATCATGACGGAACCTTAGCAGAACTCAAGGGATTTGAGATCAAGCGTAGAGGGGAGCTGAAACTCATTAAAGTTTTCCAGGCCGAGCTTTTTGACAAATTTCTCCATGGATCAACACTTGAAGAGTGTTATTCTGCTGTTGCAGCCGTTGCAAATCGGTGGCTTGACCTACTCGATAATCAAGGAAAAGATATTGCCGACAGTGAACTACTAGATTATATATCAGAATCAAGCACCATGAGCAAATCCTTAGCAGATTATGGTGAGCAAAAGTCATGTGCAGTGACCACAGCAAAACGCCTGGCTGATTTTCTTGGTGATACAATGGTCAAAGATAAAGGACTGCGTTGCCAATACATTGTTGCTTGTGAACCAAAGGGGTCACCTGTAAGTGAACGTGCTGTCCCTGTTGCCATATTTACCTTATCTAAAACGGAACCTGAAAGAATGAAGTTTTATCTGGGAAAATGGTGCAAGCAGCGCCTTAGTTCAGACCATAAAGTTGATATTCGTTTAATTATTGACTGGTCGTATTACAAGCAGCGTCTTAGTTCAGCTATCCAAAAAGTTATCACCATTCCCGCTGCAATGCAGAAGGTGGCAAATCCCGTTCCTAGGGTGCTTCATCCTGATTGGCTTCATAAAAAGGTCCGTGAAAAAGATGATAAATTTCGCCAGAGAAAACTAGCTGATATGTTCAGCTCAGCAAACAAAGATGGTGTGTTGGACAAAAATCATTCGGTGGCTCAAGATGATATGGACGATATTGAGGATTTTTGCAAAGAAAACAAGCCTGGCGTAAAGGGACCAAAGCCAATTGCACGTTCTTATGAAGTTAATAAAGAACAGTTTGGACGTGAGCAGCAAGAGAGCAAGGATCCAAAGTGCGATGACGATATCTCATTTGAGAACATTGACAAGAACGTGGATTACCAAGGTTGGCTTGAAGTGAAAAAAAGAAAATGGAAAGGAATTGTGGAGAAGAAGAAGAAACGAAGGTTGGGTGATCAACGATCTTTAAAGCAGATTGAATCTCATGAGATAAAGAAAAAAGTCACACAGGTTAGAAGAGGTGTAGGTTCATTCTTTAGGAGGCCTGAAGAAGCTTTGACTAGCTCACATTGGCAGATAATACAGCTGGTCCCAAGTCCACAGAGCGGACAATTTTTCGCTTGGGTGGTTGTGGAAGGATTGATGCTTAAAATCCCATTGACAATCCCAAGAGTGTTTTACATTAATTCCAAAGCTCCTATAGATGGAAAATTTCCCGGAAAGTGTGTCAACAAGATTCTTCCTCATGGAAAGCCTTGTTATAATATGATTGAGGTAGAGATTCAGGAAGAACAATTTAGAAAAGAAAGCAAGAAGCTTGCAGCTCTTCTTGCAGACCCTGAAATTGAGGGCATATATGAAACAAAGGTGCCGCTGGAGTTTAGTGCTATATGTCAGATAGGATGTGTATGCAAAATTGATAACACAGCCAAGCACCGTAACACCCAAGATGGATGGAAAGTTGGTGAACTTCATATGAAAACTACAACTGAATGCCGCTACCTGGAGCGATCAATTCCACTTCTTTACTTGTATAACAGCACCTCAACACTACGTGCTATATATGTTCTATATTGTCATGCATCGAAGCTTATGTCTGCCGTGGTAGTTAATCCTTATGGCGACAAGGAATTATTACCATCTGCCCTAGAGAGACAGTTTAGAGATGGTTGCCAAGAATTGTCACTTGAGTCATTGTCTTGGGATGGTATCGTTTTCCAGGTGGACTATGTTGACCATGCTGAAGCTGCCGAAAAGATTATACAAAAAGCGATAAGTGAATACAGAGAAGAAAATTCTGGACCAACTGTTGTAGTCACTGAATGCCCTGACTTTAATTCCATCAAGGATGGTATAAAAGCCCTGGATGATTTCCCATGTGTGAGGATTCCCTTCAACGGCGATGACAATAGTTATCAGCCTGTCTCCTGGCAACGTCCGGCAGCAAAATTAGCAATGTTCCGTTGTGCTGCAGCATTTCAGTGGTTGGATCGAAGGATTTCCCAGTCAAGATATGCCCATGTGCCTTTGGGGAATTTTGGACTAGATTGGTTAACATTCACAGTAGATATCTTCCTGTCCAGGGCACTCCGCGACCAGCAGCAGGTCCTTTGGGTGTCAGATAATGGTATTCCAGACCTTGGTGGTCTGAACAATGAAGAGACATTCTTTGCTGATGAGGTGCAACAGACAAGTTTGGTATATCCTGGAGCGTATAGAAAAATTTCTGTGGAGTTAAAGATCCATCACTTGGCTGTTAATGCCCTTCTGAAAAGCAACCTGGTGAGCGAGATGGAAGGAGGTGACTTTTTGGGATTTGAACAGGATGTGAATCCTAGAGGAAGTAGTTCGAACGTTAACGCCAGTTTTGATGAGACCACTGGATGTGCTCAAGCATTCCGAGTCCTGAAACAATTAATTAATAGTTGCTTGACTGATGTGTGTAAATCACGCAATATATATGCTGATTCCATTTTGCAACGTTTGTCTTGGTGGCTCTGTAGCCCTTGCTCGAAGCTTCATGATCCAGCTCTTCATCTCATGCTTCACAAGGTCATGCAAAAGGTGTTTGCGCTGCTTTTGACTGATTTGCGGAGATTAGGTGCAACAATAATATTTGCAGACTTCTCAAAGATCGTTATCGACACAGGGAAATTTGATCTATCTGCTGCTAAGGCTTATTGTGACAGCTTGCTCACAGCTGTAGGGAATAGCGATATCTTTGAGTGGATCTTGCTCGAGCCGGTTCACTACTGGCACTCATTACTCTTCATGGACCAGTATAACTACGCTGGTATCCAAGCTACCGACGATGAAATTTCACCTGACGAAGTGACTATTGAACCAAAGTGGAGTGTCGCTCGACTTTTCCCTGAGTATATTCAGAGGGATTTCGTCATAATTGTTGCCAAGTTTATATTTGACCCATGGAAATTCTCATTAGAGAAGAAAAGAGGCAGTTCAGAGAGTTTAGAGGCACAGATGGTAGAATATCTAAAGGAACAGATACCATCCAGCTTCTTTAATATGCTTGTTGCAAAAATCAATGATATCGTGTCACACATGAAGGAGATAGACGTTTCAGATGCATCTCGGGATTCTAGTCAAGCTCCCAAAAGAGATTACACGTTAGAGCTCATACAAACTATCTGTGCTGTTATGGGTCTTGACCAAAATGTCGAGCAAGATGTTCGGGTAATGAAAAGGAATCTGTTGAAGTACATTAACGTAAAAGAATTTGCCGCTGAAGCCGAATTTCTTGATCCTGGGCCTTCCTTTATCTTACCTAATGTGGCTTGCAGCAACTGTGATGCCTACAGAGACCTAGATATTGGCAGAGACCCAGCTCTATTAACAGAGAAAGAATGGTGCTGCATAGATTCACAATGTGGGAAGATATATGACAGAGAGCAGATGGAAAATAGTCTTCTCCAGATGGTGAGACAGAGAGAAAGAATGTACCACATGCAGGATCTAGTTTGCACTAGGTGCAATCAGGTGAAAGCGGCTCATTTGACAGAGCAGTGTGAGTGTTCTGGATCCTTTAGATGCAAGGAGGGCGGGTCTGAGTTCCTCAAGAGGATGGAGATTTTCTTGGATATAGCAAAGCGCCAGAAGTTTAAACTGTTAGAAGAATGCACATCTTGGATCTTAGATCCCACCGGAAGCTGGCAAACCAATACCGGAAGACATCATTCATAG |
Protein: MSGDNRRWDRKDSRRSNTQKVVKTAEDELESKLGFGLFSEGETRLGWLLTFASSSWEDPDTGKIYSCVDLYFVTQDGFYFKTKYKFRPYFYAATKEKMELEVEAYLRRRYERQVADIEIVEKEDLDLKNHLSGLRKKYLKVSFDTVQQLMEVKRDLSHVVERNQAKFDALEAYESILAGKREQRLQDCLDSLVDLREYDVPYHVRFAVDKDVRSGQWYNVSISSTDVTLEKRTDILQRAEVRVCAFDIETTKLELKFPDAEYDQIMMISYMVDGQGFLIVNRECVGEDIEDLEYTPKPEFEGYFKVTNVSNEVELLRKWFSHMQEVKPGIYVTYNGDFFDWPFIERRASHHEIKMNEELGFRCDHNQGECRAKFVCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVQFAMEKPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMVEAYKANVVCPNKNQADPEKFYQSHLLESETYIGGHVECLESGVFRSDIPTSFKLDTSAYQQLIDNLDRDLEYAITVEGKMRMDSVSNYDEVKEKIKEKLEKLRDCPIREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTNEICTACDFNRPGKTCLRKLEWVWRGVTYMAKKSDYYHLKKQIESEFVDAGANIQSSKSFLDLPKVEQQSKLKERLKKYCQKAYRRVLDKPSTEILEAGICMRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGRPLELDTDGIWCALPGSFPENFTFKTIDMKKFTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKTYESHSECSIEFEVDGPYKAMIIPASKEEGVLLKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGSPVSERAVPVAIFTLSKTEPERMKFYLGKWCKQRLSSDHKVDIRLIIDWSYYKQRLSSAIQKVITIPAAMQKVANPVPRVLHPDWLHKKVREKDDKFRQRKLADMFSSANKDGVLDKNHSVAQDDMDDIEDFCKENKPGVKGPKPIARSYEVNKEQFGREQQESKDPKCDDDISFENIDKNVDYQGWLEVKKRKWKGIVEKKKKRRLGDQRSLKQIESHEIKKKVTQVRRGVGSFFRRPEEALTSSHWQIIQLVPSPQSGQFFAWVVVEGLMLKIPLTIPRVFYINSKAPIDGKFPGKCVNKILPHGKPCYNMIEVEIQEEQFRKESKKLAALLADPEIEGIYETKVPLEFSAICQIGCVCKIDNTAKHRNTQDGWKVGELHMKTTTECRYLERSIPLLYLYNSTSTLRAIYVLYCHASKLMSAVVVNPYGDKELLPSALERQFRDGCQELSLESLSWDGIVFQVDYVDHAEAAEKIIQKAISEYREENSGPTVVVTECPDFNSIKDGIKALDDFPCVRIPFNGDDNSYQPVSWQRPAAKLAMFRCAAAFQWLDRRISQSRYAHVPLGNFGLDWLTFTVDIFLSRALRDQQQVLWVSDNGIPDLGGLNNEETFFADEVQQTSLVYPGAYRKISVELKIHHLAVNALLKSNLVSEMEGGDFLGFEQDVNPRGSSSNVNASFDETTGCAQAFRVLKQLINSCLTDVCKSRNIYADSILQRLSWWLCSPCSKLHDPALHLMLHKVMQKVFALLLTDLRRLGATIIFADFSKIVIDTGKFDLSAAKAYCDSLLTAVGNSDIFEWILLEPVHYWHSLLFMDQYNYAGIQATDDEISPDEVTIEPKWSVARLFPEYIQRDFVIIVAKFIFDPWKFSLEKKRGSSESLEAQMVEYLKEQIPSSFFNMLVAKINDIVSHMKEIDVSDASRDSSQAPKRDYTLELIQTICAVMGLDQNVEQDVRVMKRNLLKYINVKEFAAEAEFLDPGPSFILPNVACSNCDAYRDLDIGRDPALLTEKEWCCIDSQCGKIYDREQMENSLLQMVRQRERMYHMQDLVCTRCNQVKAAHLTEQCECSGSFRCKEGGSEFLKRMEIFLDIAKRQKFKLLEECTSWILDPTGSWQTNTGRHHS |